BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036E04SP1|AL430239
(920 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1322 1319 0.0
>3x_Contig1322
Length = 7535
Score = 1319 bits (665), Expect = 0.0
Identities = 691/697 (99%), Gaps = 2/697 (0%)
Strand = Plus / Minus
Query: 1 catacccttaccttatgatgttctgtcacatatgccaatctaactcttatcaagtccaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 catacccttaccttatgatgttctgtcacatatgccaatctaactcttatcaagtccaac 673
Query: 61 ggataagtacaaaacacagaacataaaccggccaacgaaccggaacaaagccttctgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ggataagtacaaaacacagaacataaaccggccaacgaaccggaacaaagccttctgaaa 613
Query: 121 tgagtctcatactctttgctcggtataatcacgtttctgatctgttcatatgctataaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tgagtctcatactctttgctcggtataatcacgtttctgatctgttcatatgctataaat 553
Query: 181 ttcactgcagcataggggaaaatcctcagcaaagtagccgaatgtccctggaaaacccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ttcactgcagcataggggaaaatcctcagcaaagtagccgaatgtccctggaaaacccct 493
Query: 241 ctcaatctatctcttgaccaaatatgcacaccagcgttcagtaacccctggaacgaacct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ctcaatctatctcttgaccaaatatgcacaccagcgttcagtaacccctggaacgaacct 433
Query: 301 gcgtatttcacataatgcggattagaagtctggaaaaggatcttgatacgatctaaaggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gcgtatttcacataatgcggattagaagtctggaaaaggatcttgatacgatctaaaggg 373
Query: 361 gctatcaaggtttttgcacacgaacctgctacccctccggcaaggcccgattttaatata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gctatcaaggtttttgcacacgaacctgctacccctccggcaaggcccgattttaatata 313
Query: 421 taatcaaaattctgtttgctggtgtatgctgctgcatcaccagattttcgcggaagcaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 taatcaaaattctgtttgctggtgtatgctgctgcatcaccagattttcgcggaagcaga 253
Query: 481 cctgaattcttcgtgttactattcatactgcaagctgtaacagtaccgccggtaccatca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 cctgaattcttcgtgttactattcatactgcaagctgtaacagtaccgccggtaccatca 193
Query: 541 tttgtcgccttctttgcagcgacatttgtcgacattccttataggacccagtttcgaatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 tttgtcgccttctttgcagcgacatttgtcgacattccttataggacccagtttcgaatt 133
Query: 601 aatggaaaacggctataatatatggcacag-acg-aaataaaaatcaagtactataactt 658
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 132 aatggaaaacggctataatatatggcacagcacgcaaataaaaatcaagtactataactt 73
Query: 659 gatcacgaagcaaaaataatgccgatatatttttgtg 695
|| ||||||||||||||||||| |||||||| ||||
Sbjct: 72 gagcacgaagcaaaaataatgcacatatatttgtgtg 36
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7827
Number of Sequences: 1807
Number of extensions: 7827
Number of successful extensions: 67
Number of sequences better than 1.0e-20: 1
length of query: 920
length of database: 10,358,551
effective HSP length: 16
effective length of query: 904
effective length of database: 10,329,639
effective search space: 9337993656
effective search space used: 9337993656
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)